miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|7534974|gb|AW671099.1|AW671099 GCACGAGGCCAGTTCTTGCTGACAAGAATGTGAAGTACCATGAGCCTGAGTACTGGAAATTTGGGGAGGAAGGAAATAAA
TACTTCCGTCATGCTACGGGGCAGATATATGCTGTTTCGAAAGATCTTGCGACTTATATTTCAATCAATCAGCCTATCCT
GCACAAATATGCAAATGAAGACGTGTCGCTTGGATCATGGTTCATTGGCTTGGAAGTTAATCACATTGATGAAAGGAACA
TGTGCTGTGGAACTCCACCAGATTGTGAGTGGAAAGGGCAAGCTGGCAATGTCTGTGTAGCATCTTTCGATTGGAGCTGC
AGTGGCATATGCAAGTCTGCTGAGAGGATCAAAGATGGACATG




Most similar to sp|A8MRC7|B3GT2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2
           OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1
          Length = 407

 Score =  224 bits (572), Expect = 1e-58
 Identities = 94/118 (79%), Positives = 110/118 (93%)
 Frame = +3

Query: 9   PVLADKNVKYHEPEYWKFGEEGNKYFRHATGQIYAVSKDLATYISINQPILHKYANEDVS 188
           PVL+ K V+YHEPEYWKFGE GNKYFRHATGQ+YA+S+DLA+YISINQ +LHKYANEDVS
Sbjct: 275 PVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYISINQHVLHKYANEDVS 334

Query: 189 LGSWFIGLEVNHIDERNMCCGTPPDCEWKGQAGNVCVASFDWSCSGICKSAERIKDGH 362
           LG+WFIG++V HID+R +CCGTPPDCEWK QAGN+CVASFDWSCSGIC+SA+RIK+ H
Sbjct: 335 LGAWFIGIDVKHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVH 392